Constants¶
Constants for Bio2BEL Entrez.
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bio2bel_entrez.constants.
GENE_INFO_COLUMNS
= ['#tax_id', 'GeneID', 'Symbol', 'dbXrefs', 'description', 'type_of_gene']¶ Columns fro gene_info.gz that are used
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bio2bel_entrez.constants.
CONSORTIUM_SPECIES_MAPPING
= {'FLYBASE': '7227', 'HGNC': '9606', 'MGI': '10090', 'RGD': '10116', 'SGD': '4932', 'WORMBASE': '6239', 'ZFIN': '7955'}¶ All namepace codes (in lowercase) that can map to ncbigene